WebNov 29, 2006 · The Animal Quantitative Trait Loci (QTL) database (AnimalQTLdb) is designed to house all publicly available QTL data on livestock animal species from which … WebQTL for trait Eggshell strength in the Chicken Genome ( Click on a chromosome to show all QTL on that chromosome; Click on a QTL name to get its details. Try alternative whole genome plot; Try enrichment analysis on this trait type; Download: All data on "Eggshell strength" NOTES: All QTL are shown to the right of its chromosome.If the number of …
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WebSep 1, 2024 · By combining chicken QTL database, chicken oviduct transcriptome and egg proteome data for five bird species, we have obtained high-quality gene lists for egg … WebChicken QTLdb data summary As of Dec 28, 2024 , there have been 18,313 QTL / eQTL / associations released for public access on the Chicken QTLdb. These data were curated from 381 publications and represent 370 different traits and 39 eQTL genes.
WebMay 12, 2024 · Here, we constructed Galbase, an easily accessible repository that integrates public chicken multi-omics data from 928 re-sequenced genomes, 429 transcriptomes, 379 epigenomes, 15,275 QTL entries, and 7,526 associations. A total of 21.67 million SNPs, 2.71 million InDels, and 488,583 cis-regulatory elements were included. WebAug 1, 2016 · Out of the 2,742 QTL in the chicken QTL database, the confidence intervals of 43 QTL overlapped with the CNVR, and 32 CNVR included one or more annotated genes. These QTL mainly affected growth and carcass traits, such as breast muscle weight, drumstick and thigh muscle weight, abdominal fat weight, as well as the abdominal fat …
WebMay 1, 2024 · For trait-related QTL regions, we reorganized different QTL with overlapping regions and excluded QTL with positions having wide CI. Only significant QTL (P value < 0.05 supplied by the chicken QTL database file) were retained in the following analysis. Selection Strategy of the Final SNP List. To ensure good polymorphism of SNP on the … WebSep 9, 2024 · Since Iranian indigenous chickens have never been subjected to selection programs for production traits, mapping the genes and quantitative trait loci (QTL) that are associated with such traits would be useful for future breeding programs.
WebMeat from Korean native chickens (KNCs) has high consumer demand; however, slow growth performance and high variation in body weight (BW) of KNCs remain an issue. Genome-wide association study (GWAS) is a powerful method to identify quantitative trait-associated genomic loci. A GWAS, based on a large-scale KNC population, is needed to …
Weband chicken QTL data. To date, we have collected 630 cattle QTL, 657 chicken QTL and 1287 pig QTL, which represent 89, 112 and 246 cattle, chicken and pig traits, … jennie haymond county attorneyWebBackfat, Loin-eye area and Meat Color-L are the top three pig traits having highest number of QTL reported. Body weight in chicken has a dominant number of more QTL than other traits. Fat yield, milk yield and twinning are the three top cattle traits that QTL are measured for. For more, see respective species QTL database "summary" for details. pa congress seatsWebMar 6, 2013 · This location overlaps with several earlier reported growth QTL in the Chicken QTL Database . Interestingly, it also maps very near to a 1.5-Mb region (173.5–175 Mb) on GGA1, identified in a recent GWAS study examining growth differences between the White Recessive Rock and the Xinghua chicken (another Chinese indigenous breed) . pa congressional district map historyWeband chicken QTL data. To date, we have collected 630 cattle QTL, 657 chicken QTL and 1287 pig QTL, which represent 89, 112 and 246 cattle, chicken and pig traits, respectively. These QTL were obtained from a total of 180 published journal papers. We continue to actively curate cattle, chicken and pig QTL data into the database and will periodically jennie gow early lifeWebSep 28, 2024 · The chicken QTL database (Hu et al. 2013) contains 3692 QTLs associated with growth traits, covering nearly the entire genome except Chr 30–33 and ChrW. Most … jennie garth wedding photosWebDec 29, 2015 · The database tools are also added to link the QTL data to other types of genomic information, such as radiation hybrid (RH) maps, finger printed contig (FPC) … pa consolidated statutes bookWebTo further filter for genes that were directly involved in yolk accumulation, the chicken quantitative trait loci database, genes within 100 kb upstream and downstream of the yolk weight trait SNP, and intersection genes in protein-protein interaction network diagrams were used to detect genes that overlapped with the differentially expressed … jennie garth weight loss